rs32055275 SNP Detail

Summary

• ID
  rs32055275
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:67234554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGA AGACGACTCC GTTTATCTGA
  Y
  TGATGACCAT GACTTTGTTA GGCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45101998	mCV24328369	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss144540261	ENSMUSSNP6759397	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss319762289	CHEV_1_67241969	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32055275					SNP	T	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:67234554 () rs orientation: forward

Symbol	Name	Function Class
Cps1	carbamoyl-phosphate synthetase 1	within coordinates
Rr412521	regulatory region 412521	1996 bp proximal
Tssr7227	transcription start site region 7227	1621 bp downstream
Tssr7228	transcription start site region 7228	1571 bp downstream