rs32056544 SNP Detail

Summary

• ID
  rs32056544
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34878409 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAAGTTAG AGGTTATCTC
  CTAAGAAACA GTCAGGAATG TCACCTGGGG CTAGAGGAAG CTCTGTCCTA CACACTCACA
  CAGTCAGCTA TCACCCTATC AGCATTTAAA ATAAACCCTA CACTGGACCC AAAGTGAATA
  AAGGCTCTTG CTGCCAGGCC TGATGGTGTG AGTTCAATCC CTGGAATGGA GAAAACCAAC
  W
  CCTTTGTAGT TCTGACTCCT ACATAAGTGC TGTGGCATGC ATGTACTCCC CAACTCCTAC
  ATGCATACTG TAAAAACACT AAGACTTTCC CTCTCTTTAT TATAGTAATA GTGGAAAGTA
  GGTAGCGAGA GAGCGAGAGA GAGCGAGAGA GCAAGAGAGA GAGCAAGAGA GAGAGAGAGA
  GAGAGAGAAA AGCCCCATCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39356984	mCV23392481	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss147562990	ENSMUSSNP5665763	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32056544					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34878409 () rs orientation: forward

Symbol	Name	Function Class
Rr500781	regulatory region 500781	1036 bp proximal
Stk3	serine/threonine kinase 3	within coordinates
Tssr133983	transcription start site region 133983	1922 bp upstream
Tssr133984	transcription start site region 133984	559 bp downstream