rs32059515 SNP Detail

Summary

• ID
  rs32059515
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:169313735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTATGTGT GTGTGTGTAT
  ATGTATGTAT ATATATACAT GTATGTATGT ATATATATAT ATATATACAT ATATATATAT
  TTGTGTATGT GATGACATGT TTATGTGTGT GTATGTGTTT GTGTTGTATA AATGTATGCA
  TATATTTGTG TGTGCATATG TATTGAGATA TGTATATATA TCATAAGATA TATATGTGTA
  Y
  GTATATATCA TAAGGAAAAT AATAAAACTC AAAACTCAGA TACATGGATA TTTAAGGAGA
  TTGTGGAGAC CTAAGTGCAT TCGACTTTTT GTCCCGTGAC AGATAGTTGG GAGAAATAAT
  TTAAAAGGGA GAAAGATCTA TTCTGGCTCC AGTTTCAGTC CACCATGATC AGTGGCTGGG
  TAGCTTTTTC TATGGGAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45102286	mCV24848832	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	C
ss146098992	ENSMUSSNP2726706	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		C
ss320102010	CHEV_1_171416297	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32059515					SNP	T	T	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:169313735 () rs orientation: forward

Symbol	Name	Function Class
Gm53643	predicted gene, 53643	318 bp upstream
Gm71126	predicted gene, 71126	496 bp downstream
Rr422941	regulatory region 422941	400 bp distal
Rr422942	regulatory region 422942	197 bp distal