rs32059546 SNP Detail

Summary

• ID
  rs32059546
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:24077493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT GTCTTACAGG CAGTGGAGAA
  R
  CCCTTTGGTT GTGGCCTGCT GTTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss47620956	NES10276008	PERLEGEN	MM_PANEL2	f	SNP		A	G	G	G	G		A	G	A
ss148072301	ENSMUSSNP4511638	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A			G
ss321491944	CHEV_5_23378313	CHEVERUD	SCREENING_POP	f	SNP							G				G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs32059546					SNP	G	A	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47620956	NES10276008	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:24077493 () rs orientation: forward

Symbol	Name	Function Class
Gm9534	predicted gene 9534	within coordinates
Gm57318	predicted gene, 57318	within coordinates
Rr608201	regulatory region 608201	1709 bp proximal
Tssr50297	transcription start site region 50297	1130 bp upstream