rs32065173 SNP Detail

Summary

• ID
  rs32065173
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:93295414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGGG TAAAAGCGGA AAAGATGTTT
  Y
  CCAAGGATTC GCCCACCTCC GAAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39358451	mCV25052428	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss325065671	CHEV_15_93227964	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32065173					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:93295414 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7581	CpG island 7581	324 bp proximal
Pphln1	periphilin 1	817 bp upstream
Tssr132763	transcription start site region 132763	449 bp upstream
Tssr132764	transcription start site region 132764	465 bp upstream
Tssr132765	transcription start site region 132765	811 bp upstream
Tssr132766	transcription start site region 132766	894 bp upstream
Tssr135972	transcription start site region 135972	659 bp downstream
Tssr135973	transcription start site region 135973	730 bp downstream
Tssr135974	transcription start site region 135974	812 bp downstream
Tssr135975	transcription start site region 135975	1086 bp downstream
Zcrb1	zinc finger CCHC-type and RNA binding motif 1	within coordinates