rs32065798 SNP Detail

Summary

• ID
  rs32065798
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:138801925 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGAGAGGGG TTAACACTGT TACCAGACTA AGCTTTGCAT
  AATAAATAGA GCACAGCCTA ACAAAACCTC TGCATGCGGC AGCATGTGGC CTAGCTTTCC
  R
  TGGGGCCAGT CCCCTCTTGA GTCTGAGCTG CTTTGTTTCA GTGCCCTCCT TGGGACTGAA
  TGTCAGTTCC TGAGTGGATG TGTGGGGCCA TCACTCCCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss46100699	mCV23697221	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145976113	ENSMUSSNP4301600	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss322467809	CHEV_7_146407908	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32065798					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:138801925 () rs orientation: forward

Symbol	Name	Function Class
Lrrc27	leucine rich repeat containing 27	within coordinates
Rr657519	regulatory region 657519	1369 bp distal
Rr657520	regulatory region 657520	198 bp distal
Tssr69706	transcription start site region 69706	1390 bp downstream