rs32068048 SNP Detail

Summary

• ID
  rs32068048
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:151967559 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTT GGCCTCAAAC TCAGAAATCC
  S
  CCTGCCTCTG CCTCCCAGTC CTGGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45102902	mCV23214197	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss145725630	ENSMUSSNP395741	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320062299	CHEV_1_153938938	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32068048					SNP	G	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151967559 () rs orientation: forward

Symbol	Name	Function Class
1700025G04Rik	RIKEN cDNA 1700025G04 gene	mRNA-UTR
Cpgi853	CpG island 853	557 bp distal
Rr420417	regulatory region 420417	1694 bp distal
Rr420418	regulatory region 420418	1193 bp distal
Tssr14207	transcription start site region 14207	1641 bp upstream
Tssr14208	transcription start site region 14208	1599 bp upstream
Tssr14209	transcription start site region 14209	1554 bp upstream
Tssr14210	transcription start site region 14210	1501 bp upstream
Tssr14211	transcription start site region 14211	1476 bp upstream