CTTGG CTAGGTTCTG AGTCTTCCAA R TAGCTGGTCT GTTGTCAGGA TCTCC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46101136 | mCV25049456 | ABI | CRAMUS_MOUSE | f | SNP | G | A | A | A | G | ||
ss148472684 | ENSMUSSNP3418922 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | |||||
ss322116882 | CHEV_7_19897710 | CHEVERUD | SCREENING_POP | f | SNP | A | G | |||||
SNP Consensus Information | ||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs32068383 | SNP | G | A | A | A | G | A | G |
Location: Chr7:19046286 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi18468 | CpG island 18468 | 1604 bp distal | ||||||
Gm57205 | predicted gene, 57205 | 1178 bp downstream | ||||||
Rr400144 | regulatory region 400144 | 1842 bp downstream | ||||||
Rr643089 | regulatory region 643089 | 1920 bp distal | ||||||
Rr643090 | regulatory region 643090 | 1131 bp distal | ||||||
Tssr2108 | transcription start site region 2108 | 1874 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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