rs32070627 SNP Detail

Summary

• ID
  rs32070627
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:128064327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTTATCAA AAACTAATAA
  TCAGTGAAAA CAGCAAAGAG GCTCAACGAC CAGGTCTCAT GCCAAAACAG TCTGGAGTTC
  GGTATTGGAG GACACGGGCT GCTAGTATTG AGATGCTAAA GCAAGAGAGG AGATAGAATC
  ATGACAATCT ACTGGATGTA CACCACATTT GTGGCTGAGG CCCCTAGGGG TCAGACGAAG
  R
  GATGGCATTC CCTGCCTGAG ACTGGAGTTA ACAGTGGTTG TGAGCTGCAT ATGAGTGCTG
  AGAACCAAAC TGGAAGCCAC TGTAAGTGTG CTCTTAACCA GCTCTCCCGT GCCCCCAGCT
  GCACACTGTC TCATTGAAGG AGAGAAAAGG TCTGGTGGCC AACAGAGAGC TTTGGGGTAG
  CTTATAGATC TGCTTAGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46101353	mCV24293246	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss145891484	ENSMUSSNP1327684	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32070627					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:128064327 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19791	CpG island 19791	365 bp distal
Gm32816	predicted gene, 32816	within coordinates
Rr368466	regulatory region 368466	666 bp downstream
Rr656041	regulatory region 656041	1617 bp distal
Rr656042	regulatory region 656042	514 bp distal
Rr656043	regulatory region 656043	within coordinates
Rr656044	regulatory region 656044	256 bp distal
Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	886 bp upstream
Tssr2414	transcription start site region 2414	1408 bp upstream
Tssr69425	transcription start site region 69425	629 bp downstream
Tssr75110	transcription start site region 75110	1426 bp upstream
Tssr75111	transcription start site region 75111	1277 bp upstream
Tssr75112	transcription start site region 75112	1216 bp upstream
Tssr75113	transcription start site region 75113	1203 bp upstream
Tssr75114	transcription start site region 75114	1043 bp upstream
Tssr75115	transcription start site region 75115	981 bp upstream
Tssr75116	transcription start site region 75116	941 bp upstream