rs32071271 SNP Detail

Summary

• ID
  rs32071271
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90884170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATCC CACCTAGTGG TGAGCCTGAC
  R
  CTGCTCTTGC ACTTCCTGTC ACAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J
ss45103295	mCV24395151	ABI	CRAMUS_MOUSE	f	SNP	G			A
ss51301156	NES14511531	PERLEGEN	MM_PANEL2	f	SNP		A	A		G	A		G	A
ss319838443	CHEV_1_92853025	CHEVERUD	SCREENING_POP	f	SNP							G			A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J
rs32071271					SNP	G	A	A	A	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51301156	NES14511531	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90884170 () rs orientation: forward

Symbol	Name	Function Class
Rab17	RAB17, member RAS oncogene family	1685 bp downstream
Rr415504	regulatory region 415504	within coordinates
Rr415505	regulatory region 415505	434 bp proximal
Rr415506	regulatory region 415506	581 bp proximal