rs32079070 SNP Detail

Summary

• ID
  rs32079070
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:138800669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCAAAGCC AGTGAGCTGG
  GTCAGGGCAG CTGCAGTAAC TGCCTCTGTG CACATCACGT TAAGCTTCTT GGGGCAGAAG
  AAATAGGTCA GTGGTTGAAA AAGCTTTCTG GGGAGCAGGC TAGGCTCTCT GTAAACACCC
  ACATGGACAG TTCTTGACTC TCTGTGACTC TAGTTTCAGA GGATCTGACA CCCTCTTCAT
  W
  CATATGTGTA TATATATATA TATATATATA TATATATATA TATGGTTTGT TTTTTTTTGA
  GACAGGGTTT CTCTGTGTAG CCCTAGCTGT CCTGGAACTC ACTTTGTAGA CCAGGCTGGC
  CTCGAACTCA GAAATCTGCC TGCCTCTGCC TCCCGAGTGC TGGGATTAAA GGCGTGCGCC
  ACCACGCCCG GCTAATTTTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46102422	mCV23696935	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32079070					SNP	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:138800669 () rs orientation: forward

Symbol	Name	Function Class
Lrrc27	leucine rich repeat containing 27	within coordinates
Tssr69706	transcription start site region 69706	134 bp downstream