rs32079386 SNP Detail

Summary

• ID
  rs32079386
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:4026722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGG GCATTGTATA CGGACATATA
  Y
  ATGCAGGCAA AATGCACATA AAGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss39360132	mCV23812958	ABI	CRAMUS_MOUSE	f	SNP	C		T
ss147038900	ENSMUSSNP3675003	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32079386					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:4026722 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6911	CpG island 6911	947 bp distal
Gm2093	predicted gene 2093	within coordinates
Rimoc1	RAB7A interacting MON1-CCZ1 complex subunit 1	1496 bp upstream
Rr369897	regulatory region 369897	288 bp downstream
Rr498628	regulatory region 498628	1507 bp distal
Rr498629	regulatory region 498629	1193 bp distal
Rr498630	regulatory region 498630	399 bp distal
Tssr133595	transcription start site region 133595	1995 bp upstream
Tssr133596	transcription start site region 133596	1480 bp upstream