rs32080733 SNP Detail

Summary

• ID
  rs32080733
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95055239 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCATGGGAAC AATGCATGGC TCCAGGGAGG GAAAGACCAG
  TTGCTCTGGG CTCCAAACTA CAGCCCCGTA GGCCAGCCTG TGAATGTGTA GGTCAGGCTG
  M
  ACTGTGCCTG TTTACCCTAG AGGCCAGTGG CCAGCACCAA GCTCTCAAGG TTTGTCAGTC
  AAGAGGTGGC TGCAGGTCTG GCTTGAGGCC ACTAATCACA                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47623565	NES11434342	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32080733					SNP	C	C	C	C	C	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47623565	NES11434342	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95055239 () rs orientation: forward

Symbol	Name	Function Class
C78859	expressed sequence C78859	511 bp downstream
Rr667949	regulatory region 667949	1734 bp proximal
Slc12a3	solute carrier family 12, member 3	590 bp upstream
Tssr78837	transcription start site region 78837	590 bp upstream
Tssr78838	transcription start site region 78838	1015 bp upstream