rs32082045 SNP Detail

Summary

• ID
  rs32082045
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82503635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGAGGTCCCC ACAGACCATA GAACTAAGCT CACTGCACAA CCATTGTTGT CTTAGGGTTT
  CTGTTCCTGC ACAAAACTTC ATGACCAAGA ACCAAGCTGG GGAGGAAAGG GTTTATTCAT
  CTTACTCTTC CTCATTGCTG TTCATTACCA AAGGAAGTCA GAACTGGATC TCAAGTAGGT
  CAGGAAGCAG GAATTGATGC AGAGGCCATG GAGGGATGCT ACTTACTGGC TTGCTTCCCC
  TGGCTTGCTC AGCTTCCTTC CTTCCTTCCT TCCTTCCTTC CTTCCTTCCT TCCTTCCTTC
  Y
  TTCTTTCCTT CCTTCCTTCC TTCCTTCCTT CCTTCCTTCC TTTCCTTCTT TCTTCTTTTT
  CTTTTCTCTT TCTTTCTTTC TTTCTCTTTC TTTCTTTCTT TCTTTCTTTC TTTCTTTCTT
  TCTTTCTTTC TTTCTTTCTT TCTGTTTGTT TTCTTTTTCG AGACAGGGTT TCTCTGTATA
  GCCCCGGCTG TCCTGGAACT CATTTTGTTT GTAGATCAGG CTGGCCTCAA ACTCAGAAAT
  CTGCTTGCCT CTGCCTCCTG AGTGCTAGGA TTAATGGCGT GCACCACCAT GCCCGGTTCA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39360321	mCV25425396	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss148232970	ENSMUSSNP1154518	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32082045					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82503635 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d34	cytochrome P450, family 2, subfamily d, polypeptide 34	within coordinates
Gm49431	predicted gene, 49431	1658 bp upstream
Rr310820	regulatory region 310820	1264 bp proximal
Tssr135558	transcription start site region 135558	1497 bp downstream