rs32082200 SNP Detail

Summary

• ID
  rs32082200
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:119348326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCT AAAATCAAAG TCAAAGTGAT
  Y
  ATCACAAAGC AAAGCCGAGA CATTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45604658	mCV22799967	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss147330613	ENSMUSSNP5448456	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32082200					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119348326 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14703	CpG island 14703	899 bp proximal
Rimkla	ribosomal modification protein rimK-like family member A	within coordinates
Rr598595	regulatory region 598595	1169 bp distal
Rr598596	regulatory region 598596	38 bp distal
Rr598597	regulatory region 598597	118 bp distal
Rr598598	regulatory region 598598	1489 bp proximal
Tssr43121	transcription start site region 43121	1418 bp downstream
Tssr43122	transcription start site region 43122	1434 bp downstream