rs32082454 SNP Detail

Summary

• ID
  rs32082454
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117039241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTTGGGAGG CAGAGGCAGG GGATTTGTGA GTTCGAGGCC
  TGGTCTACAG GAGTTCCAGG ACTACACAGA GAAACCCTTC CTTGAAAAAC CAAAACAAAC
  R
  CCAAAAAAAA AAAAAAAAAA AAAAAAAAGC CGGGCGTGGT AGTGCATGAC CTTTAATCCC
  AGCACTCAGG AGGCCGAGGA AGCCGCGGGT CCAACAAAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45605204	mCV22301670	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147286082	ENSMUSSNP5651526	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32082454					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117039241 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14654	CpG island 14654	116 bp proximal
Gm68778	predicted gene, 68778	1795 bp downstream
Kif2c	kinesin family member 2C	within coordinates
Rr398412	regulatory region 398412	462 bp upstream
Rr598074	regulatory region 598074	within coordinates
Rr598075	regulatory region 598075	585 bp proximal
Tssr42965	transcription start site region 42965	493 bp downstream
Tssr42966	transcription start site region 42966	579 bp downstream
Tssr42967	transcription start site region 42967	905 bp downstream