rs32082498 SNP Detail

Summary

• ID
  rs32082498
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95056660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGACCAAACA AGACCCCTTG TTTGAATAGG GATGCTGAGA
  TAGGTACTGG GATGAAGGTC CCAGAGTAGG CTGCGGTTGG TAGGAATACG AAATAGAAGA
  Y
  GACCATGCTG GAGTCCAGGC CTGGGTTCAA GACTCTCTGT GTCAGAGACC TGGTGTGTGG
  CGTGTGACAT ACTGCTTCAC CTCCCATCCC GTGTCACTTC                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47623580	NES11434347	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32082498					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47623580	NES11434347	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95056660 () rs orientation: forward

Symbol	Name	Function Class
C78859	expressed sequence C78859	1932 bp downstream
Rr667949	regulatory region 667949	313 bp proximal
Rr667950	regulatory region 667950	609 bp proximal
Rr667951	regulatory region 667951	863 bp proximal
Slc12a3	solute carrier family 12, member 3	within coordinates
Tssr78837	transcription start site region 78837	815 bp downstream
Tssr78838	transcription start site region 78838	379 bp downstream