rs32082557 SNP Detail

Summary

• ID
  rs32082557
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18912761 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCGGGGCG AACCCGTTGG
  AGAGGAGAAC GAGGGGAAGG GATGAACAGG ACTGGACCTT TTGAGCTTGA AAAGTCTTGG
  ATACAGCGAG CGAATGTTGG TACCCGTGAC AGAATATTGT CGTTCATCAG AGGACGTTGG
  GAGAGCGTTC TAGAACGTTG TCACTGGGAA TAGCTTGATG TCATCTTTAA AATGCTGATA
  Y
  GACTTAAAGG ATATTTCACA TCTTAGTCAC AGAATCTTAA AACCAAAGCG AGGCCCCGGA
  ATTGGTGGAA TCTGTATGAA AAAGAGGGAC TTCCCCCAAG GTCGCATGGT CAGGACACTG
  TGGTAGAGAG AGGAGGTGGG GATTTCCTTC CTCCTTGCCG GAACCCTCCT CTTCGGCCCA
  TCTCCGCGCA TCCTCATCGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss46102460	mCV25048407	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs32082557					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18912761 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18451	CpG island 18451	542 bp distal
Cpgi18452	CpG island 18452	121 bp proximal
Eml2	echinoderm microtubule associated protein like 2	within coordinates
Rr155272	regulatory region 155272	within coordinates
Rr167138	regulatory region 167138	within coordinates
Tssr64795	transcription start site region 64795	597 bp downstream
Tssr64796	transcription start site region 64796	145 bp upstream