rs32083886 SNP Detail

Summary

• ID
  rs32083886
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30450357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCAT TTGAGCCAGG TGTGGAGTTA
  R
  TGGAGACAGC TGGGTCACAC TCTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46103339	mCV25317051	ABI	CRAMUS_MOUSE	f	SNP		A					G		G
ss60990283	NES16139127	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G	G		G	G	G	G		G	A	G	G		G
ss148687367	ENSMUSSNP4388211	ENSEMBL	ENSEMBL_Sanger	f	SNP		A							G
ss322136406	CHEV_7_31535951	CHEVERUD	SCREENING_POP	f	SNP												A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32083886					SNP	A	A	G	A	G	G	G	G	G	G	G	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60990283	NES16139127	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30450357 () rs orientation: forward

Symbol	Name	Function Class
Rr644909	regulatory region 644909	753 bp distal
Sbsn	suprabasin	539 bp upstream
Tmem147os	transmembrane protein 147, opposite strand	within coordinates
Tssr65808	transcription start site region 65808	594 bp upstream
Tssr71856	transcription start site region 71856	1225 bp downstream