rs32083946 SNP Detail

Summary

• ID
  rs32083946
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95057330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCCCTAGTG AGCAGTTTAG ACCTGGAGCT CAGTTTGGGC
  CTCAGTTTCC CCATCAGCAG TGGCCTCCAA TTAATTGTAT TTGGCTTCCC ACAGTTCTTG
  R
  GCGCTCTTGG CCAAGACCCA ATCCTAAGAA GATCTCTGCT TAGCTACTCA CTAGTGTTGT
  AGCCTTAGGA AAGTTACTTA GCTACTCCTG CCTCAGTTTC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47623598	NES11434353	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32083946					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47623598	NES11434353	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95057330 () rs orientation: forward

Symbol	Name	Function Class
Rr667949	regulatory region 667949	336 bp distal
Rr667950	regulatory region 667950	within coordinates
Rr667951	regulatory region 667951	193 bp proximal
Slc12a3	solute carrier family 12, member 3	within coordinates
Tssr78837	transcription start site region 78837	1485 bp downstream
Tssr78838	transcription start site region 78838	1049 bp downstream