rs32084882 SNP Detail

Summary

• ID
  rs32084882
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131646362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTTCTAC CCCCATCCAT
  TCAGGCTCCT CCCAGTTCAG AAGGGAAAGC GGGTGTCTAG GTCACACAGA GGCCAGGGCA
  GAATCAAATC AGGTCCAGAC TGCCTGGGGA TTATCACTGT CACCACCCAG AGGCCTCTGG
  CCAGCCACAC ATCTGCAGAG ACAGGATGAA CCCCCACCCC CAGCCCCCAG CCTGGGAGGT
  Y
  CCTCTGCAGG GGAGGCCTGT GGGAAGGGAG GCCTGCCTCC CCGTCCTGGT TTCCTATCTT
  CCTGCTTGTT ACACTTTCTC TGAGCTCTCA GAGAGAACCA GAGCCAGGGT TCTACCTGGG
  AAAGGGACCT GTAGTCACCA CCCCCCTCAC AGCTCAGCCC AATGCCTGAG GCAGTAGTCA
  GAGGACAGGC AGGCTGATGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss45604884	mCV22587452	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss147471952	ENSMUSSNP2405442	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs32084882					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131646362 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14947	CpG island 14947	660 bp proximal
Gm12992	predicted gene 12992	within coordinates
Gm50475	predicted gene, 50475	1765 bp downstream
Rr85750	regulatory region 85750	1762 bp distal
Rr85751	regulatory region 85751	1162 bp distal
Rr100128	regulatory region 100128	within coordinates
Tssr39357	transcription start site region 39357	1517 bp upstream
Tssr43616	transcription start site region 43616	1651 bp downstream
Tssr43617	transcription start site region 43617	1968 bp downstream