rs32087551 SNP Detail

Summary

• ID
  rs32087551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:111830813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAACT GTCCTTTTCC TTCCTTCTCC
  R
  ACTTTGCTGG TGGGTTCCTG GCATC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46639788	NES10390382	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	A	G	G	G	G	G		G	G	A	G		G
ss149073480	ENSMUSSNP5372037	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							G
ss321643808	CHEV_5_112111967	CHEVERUD	SCREENING_POP	f	SNP												G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32087551					SNP	A	G	G	G	G	A	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46639788	NES10390382	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:111830813 () rs orientation: forward

Symbol	Name	Function Class
Gm71303	predicted gene, 71303	1192 bp upstream
Gm71305	predicted gene, 71305	645 bp downstream
Rr617176	regulatory region 617176	924 bp distal
Rr617177	regulatory region 617177	42 bp proximal
Rr617178	regulatory region 617178	145 bp proximal