rs32090594 SNP Detail

Summary

• ID
  rs32090594
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75104691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGAATTACCT ACATAGACTG GTTACTGAGC ACATCTGCAG TAGATTGTCT TTACTGGTAA
  TTGACTTAGT AGGGTCTGGC CCACCATAGG CAGTATCATT CCTTTAACAG GTGGTCTTGA
  AGTATATTAG AAAGTTAGCG GCCGGGCATG CTGGCGCACG CCTTTAATCC CAGCACTTGG
  GAGGCAGAGG CAGGCAGATT TCTGAGTTCA AGGCCAGCCT GGTCTACAAA GTAAGTTGCA
  GGACAGCCCG GTCTACACAA AGAAACCCTG TCTCGAAAAA CCAAAAAAAA AAAGAAGAAA
  R
  AAGGAAGGAA GGAAGGAAGG AAGGAAGTTA GCTGCATGTG AACCAGCCGG CAAGCAGTGT
  CCTCCATGGT TCCTGCTGTA CTTCTTTGGC TGTGAAGTGA GCTTGTTTGG AGGCCGAGCT
  GTGTGGCTTC GCAAGCAGGC CTGCCTTCAA GATTCTGTCC TGAGTTCCTG TCATGGCTTG
  CCTCAATGAT AGACCGTGAC CTGGAATTGT TGACTGAATA AAACATTCCC TCCCCTAAAA
  TGCTTTTAAT CTGAGTGTTT TACCACAGCA ACAGCACCAG GGCATGCACT TAGCACAGTG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45104776	mCV23611680	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32090594					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75104691 () rs orientation: forward

Symbol	Name	Function Class
Slc23a3	solute carrier family 23 (nucleobase transporters), member 3	within coordinates
Tssr7483	transcription start site region 7483	503 bp upstream
Tssr12338	transcription start site region 12338	530 bp downstream
Tssr12339	transcription start site region 12339	554 bp downstream
Tssr12340	transcription start site region 12340	596 bp downstream