rs32091527 SNP Detail

Summary

• ID
  rs32091527
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:92897758 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTGGCTTG GAAGACCAAA
  GACTCTGCTT ACTCTTACCT AATGGAAGCT TCTGGTGGAA TGCAAACTCA AGCCCCCATT
  CTGGCAGGTG AGGAGGTGGG GTTAGAAATT GGGGGAACTC TACATTTCAG GGAACAGAGA
  CAGTTGGTGA GGAGCTCCAA AGGTCACGGG CTCAGAGGGC TTTTTCTCTT GATGGCAGCC
  Y
  GCGCTGTGCT TGTAAATTCT TCGGAGAGCT TTCACAGAAA AAAAAAAAAA AAAAAGCAAA
  ATTGTGTCCG TTCTGCCCCT CTTTTATCCC TGATTAAATG GTAGAGGATA TTTAAAGCAC
  TGTGTTGGAT GTATATTTCA TGATTACTGT CAGCATTCCT CCATGCCTCC TGTCTCTCAT
  TAGCATGGTT AATTGAGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48123684	NES12140168	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32091527					SNP	C	C	C	C	C	C	T	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48123684	NES12140168	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:92897758 () rs orientation: forward

Symbol	Name	Function Class
Gm30085	predicted gene, 30085	1641 bp upstream
Gm62083	predicted gene, 62083	1255 bp downstream
Rr391110	regulatory region 391110	1182 bp upstream
Rr508114	regulatory region 508114	1639 bp proximal