rs32091530 SNP Detail

Summary

• ID
  rs32091530
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:92898657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAAAGAAG GAAGGAAGGA
  AGGAAGGAAG GAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AAAAGGAAGG CAGGCAGGAG
  CTAACAGAAC AGAGAAGAGG GAGGGTGGTC ACAAGTATAT CTCACAGCTC TGCCTCATGT
  AAAGCAGGTA CAGTTTTTCT ATCTGCTTTC GCCATGTAAT TAATGGCCTT TCCATTAAAG
  R
  TTTCTGTGTA TGAGTGAATA ATATGAATTC GGAGAACAAC CAAGAAAGCT GTTGTCAGGC
  CTTCGATAAA CCTAACAGCC ACGTGCTGGG ATGTTTTTAA CCTCTGGGTG GTTAACATAC
  ATTGCTGGTC CATCTAAATT TCTAGGCCTT AACTCTTATG ACCAAAGAGC AGTCCCTATA
  TTGAAGAGGA AGGGGGACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48123690	NES12140131	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32091530					SNP	A	A	A	A	A	A	G	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48123690	NES12140131	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:92898657 () rs orientation: forward

Symbol	Name	Function Class
Gm30085	predicted gene, 30085	742 bp upstream
Gm62083	predicted gene, 62083	356 bp downstream
Rr391110	regulatory region 391110	283 bp upstream
Rr508114	regulatory region 508114	740 bp proximal
Rr508115	regulatory region 508115	1123 bp proximal
Rr508116	regulatory region 508116	1274 bp proximal
Rr508117	regulatory region 508117	1413 bp proximal
Rr508118	regulatory region 508118	1636 bp proximal
Tssr132761	transcription start site region 132761	1428 bp upstream