rs32092505 SNP Detail

Summary

• ID
  rs32092505
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:113415014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAG TTTCAACAAC ATGCCAATCC
  R
  TCAGAACTGA GGTTAGGGAG ATGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46103475	mCV23606264	ABI	CRAMUS_MOUSE	f	SNP		G	G					G		A
ss50460081	NES14118639	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	A		G	A	G	G		A	G	G	A		G
ss145683881	ENSMUSSNP1436730	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							A
ss322424744	CHEV_7_120959295	CHEVERUD	SCREENING_POP	f	SNP													G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32092505					SNP	G	G	G	G	G	G	A	G	G	A	G	G	G	A	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50460081	NES14118639	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:113415014 () rs orientation: forward

Symbol	Name	Function Class
Rr653873	regulatory region 653873	1132 bp distal
Rr653874	regulatory region 653874	1111 bp proximal
Spon1	spondin 1, (f-spondin) extracellular matrix protein	within coordinates
Tssr74335	transcription start site region 74335	1200 bp downstream