rs32092736 SNP Detail

Summary

• ID
  rs32092736
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:92898905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTTGTCA GGCCTTCGAT
  AAACCTAACA GCCACGTGCT GGGATGTTTT TAACCTCTGG GTGGTTAACA TACATTGCTG
  GTCCATCTAA ATTTCTAGGC CTTAACTCTT ATGACCAAAG AGCAGTCCCT ATATTGAAGA
  GGAAGGGGGA CATCACTTTA GATGTCATTA AACCAAAGGC CTGAGATGGG ATTGCCCTGG
  R
  CCACCCAGTT AAGCCCTAAG TGCTACGGCA TATGTTCTTA GAGGAGAGTC TTGCTGTCTT
  AGTCAGGGTT TCTATTCCTG CACAAAGCAT CATGACCAAG AAGCAAGTTG GGGAGGAAAG
  GGTTTATTCA GCTTACACTT CCATATTGCA GTTCATCACC AAAGGAAGTC AGGACTGGAA
  CTCACACCGG GCAGGAACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48123696	NES12140137	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32092736					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48123696	NES12140137	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:92898905 () rs orientation: forward

Symbol	Name	Function Class
Gm30085	predicted gene, 30085	494 bp upstream
Gm62083	predicted gene, 62083	108 bp downstream
Rr391110	regulatory region 391110	35 bp upstream
Rr508114	regulatory region 508114	492 bp proximal
Rr508115	regulatory region 508115	875 bp proximal
Rr508116	regulatory region 508116	1026 bp proximal
Rr508117	regulatory region 508117	1165 bp proximal
Rr508118	regulatory region 508118	1388 bp proximal
Tssr132761	transcription start site region 132761	1180 bp upstream