rs32092742 SNP Detail

Summary

• ID
  rs32092742
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:92899806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCATGCCAG TGCTTCTTCA CATTAAGACT CCAAGAATGA
  CCGTTTCCCG CGGGAAAGAG AGCAGCCGAA CGCCAAACAT CAGCACAAAC AGAAGGTGTT
  S
  GAGAGACTCC TTAGGATCCG GAGACGGTAA GATAACACAA CATGTCAGGA AACACTGGCA
  CTTCAAGAAA CGACTGGGTG TTGAAAGAAA CGCCCTAGAA                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48123702	NES12140106	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32092742					SNP	G	G	G	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48123702	NES12140106	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:92899806 () rs orientation: forward

Symbol	Name	Function Class
Gm30085	predicted gene, 30085	within coordinates
Gm62083	predicted gene, 62083	within coordinates
Rr391110	regulatory region 391110	within coordinates
Rr508114	regulatory region 508114	27 bp distal
Rr508115	regulatory region 508115	within coordinates
Rr508116	regulatory region 508116	125 bp proximal
Rr508117	regulatory region 508117	264 bp proximal
Rr508118	regulatory region 508118	487 bp proximal
Rr508119	regulatory region 508119	1503 bp proximal
Tssr132761	transcription start site region 132761	279 bp upstream