rs32092898 SNP Detail

Summary

• ID
  rs32092898
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191176133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTCTAGATT TTGCTGAGTT CAAGGAGGGC TGAGGATACG
  TGTTATTAAT TTCTTTATCC TTAACACTGA ATTAGTTTAA GAACTAACAA GCATATTAAA
  R
  CAGGAAGGAA GAAAGAAAGG GAAGAAAGCC GAATGAAGGA GGGAAAAATT CAAGCATGAT
  GGTGCATGTC TATAATCCCA GTACCCAGGA GTCTGAGGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45105449	mCV23930958	ABI	CRAMUS_MOUSE	f	SNP		A	A					A		G
ss49546445	NES12907451	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A		A	G	A	G		A	G	G	G		G
ss146505897	ENSMUSSNP1684093	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A							G
ss320195283	CHEV_1_193267815	CHEVERUD	SCREENING_POP	f	SNP													G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32092898					SNP	G	A	A	A	A	A	A	A	A	G	A	G	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49546445	NES12907451	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191176133 () rs orientation: forward

Symbol	Name	Function Class
Gm32200	predicted gene, 32200	within coordinates
Rr372646	regulatory region 372646	1701 bp upstream
Tssr15793	transcription start site region 15793	1867 bp downstream