rs32094215 SNP Detail

Summary

• ID
  rs32094215
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95159495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCATAGG ATACCTTCAT
  AACACAGACC GAACACAGGG TAACTCTGGG GAAATGGTTC TCTCAGAACC CTTATTGGCA
  GGCCTGTTTC CACAACAGGC ATGGAACTGG GTTTCCGATC CGGTGTTTCT CATTGCCATT
  ATTGTGTGAC CTTGACATCT CTGGATGAGA CATCTAATGA GATGTTAACC TCTGCCTGGA
  Y
  CCTTCATGGG GCTGTGTGGG TTTAAGTACA TCTAAATATG GCCCGTGCTT GTCTTTCTGG
  GTGGTGGCTA CTTGTCTGTG TCCACTGAAA GCCCTCTGTC AGCAGGGAAG GATGTAGGTC
  CAGCAACACA TAATGGTTGG GAGAATATGG GGTGAGCCTT ACTGTTGGGC TGTAACTCTT
  CTCACACTAA CAGATGACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss47624876	NES11428619	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs32094215					SNP	T	T	T	T	T	T	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47624876	NES11428619	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95159495 () rs orientation: forward

Symbol	Name	Function Class
9330175E14Rik	RIKEN cDNA 9330175E14 gene	260 bp downstream
Cpgi20846	CpG island 20846	1004 bp proximal
Nlrc5	NLR family, CARD domain containing 5	1489 bp upstream
Rr401062	regulatory region 401062	1315 bp upstream
Rr667981	regulatory region 667981	850 bp proximal
Rr667982	regulatory region 667982	1320 bp proximal
Rr667983	regulatory region 667983	1535 bp proximal
Tssr78863	transcription start site region 78863	1476 bp upstream
Tssr78864	transcription start site region 78864	1511 bp upstream
Tssr78865	transcription start site region 78865	1856 bp upstream
Tssr82495	transcription start site region 82495	1275 bp downstream
Tssr82496	transcription start site region 82496	1392 bp downstream