rs32095439 SNP Detail

Summary

• ID
  rs32095439
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136506618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCTCAATGAA TGCACAGCTA CAAAGCTCTG ATGTTCATGG CACAGCCGTG TGTCATCTAT
  AGCCAAGGGT GGTTGTAAAG ATGCTTAGAA ATACCTTTAT GTGCCCTGAG GTTGGGCTGC
  ACACCTTTGA TCCCAGCCCT TGGGAGAAAG AGGCAGGAGG ATCTCTGTGA GTTTGAGGCT
  AGCCTGGTCT ACAGAGCGTG TTCCAGGACA GATAGACAGG AGTATACAGA GAAATCTTAT
  CTGGAAAAAA GAAAAAGAAA GAAACACACA CACACACACA CACACACACA CACACACACA
  S
  AGAGAGAGAG AGAGAGAGAG AGAGACTTCA TGCCATCCAA TGGCTTCCAC TTTTTAAGTG
  TTCCAGCTAA CTTATAAAAA GAAACTGTCT AGGGCTGGAG AGATGGCTCA GCCATTAAAA
  GCACTATCTG CTCTTCCCGA GGTCCTGAGT TCAATTCCCA GCAACCACGT GGTGGCTCAC
  AATCATCTGT AATGGGATCT GATGCTTCTG GGATGTCCAA AAACAGAGAC AGTATACTCA
  CATACATAAA ATATATAAAT CTTTTAAAAG GAGAAAAGAA AAAAAAAAAA AAAAGGAAGA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45106214	mCV23236757	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32095439					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136506618 () rs orientation: forward

Symbol	Name	Function Class
4933409D19Rik	RIKEN cDNA 4933409D19 gene	within coordinates
Gm33994	predicted gene, 33994	within coordinates
Gm57131	predicted gene, 57131	within coordinates
Rr367011	regulatory region 367011	624 bp upstream
Rr419471	regulatory region 419471	417 bp distal
Rr419472	regulatory region 419472	463 bp proximal
Rr419473	regulatory region 419473	587 bp proximal
Tssr9072	transcription start site region 9072	760 bp upstream
Tssr9073	transcription start site region 9073	786 bp upstream
Tssr13942	transcription start site region 13942	1649 bp downstream
Tssr13943	transcription start site region 13943	1674 bp downstream
Tssr13944	transcription start site region 13944	1701 bp downstream