rs32095791 SNP Detail

Summary

• ID
  rs32095791
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95160664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGTTCTGG GACAAAGACA
  AGAGGCAGGG CAGGTTGTAG AACTTGGAAC AGAGACAGGA ACTTTCCAGG GCTGACGCTG
  GCCCTGTAGT CCTTTTCTTA CCGCCCACCT CTTTCCATCC CTTATCCCTG CACCAAGCTT
  TCTTCTGTAG CCTAGGCAAC CCTTGCACCC AGGGACCAGC AGAGACACAC CTGGAGGCCG
  Y
  GCTTGTCCAG GTCAGGTCTC AGGTGATGAG CCGCTGTCGC CACTGGACCC TGGACCCAAC
  TCCACGAAGT TTTGCTCAGT GGCTCCTCCT GCCTTCATCC TACATCGTCT CTGGGAAGTG
  TAGAAAGAAG GGTTGTGCGG GTCCTGCTGC GCTCTGGCCC CACCCACTTC CTGGCAGATG
  CCCACCTTAC CCAGTCTCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47624903	NES11428546	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32095791					SNP	C	C	C	C	C	C	T	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47624903	NES11428546	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95160664 () rs orientation: forward

Symbol	Name	Function Class
9330175E14Rik	RIKEN cDNA 9330175E14 gene	within coordinates
Cpgi20846	CpG island 20846	within coordinates
Nlrc5	NLR family, CARD domain containing 5	320 bp upstream
Rr401062	regulatory region 401062	146 bp upstream
Rr667981	regulatory region 667981	within coordinates
Rr667982	regulatory region 667982	151 bp proximal
Rr667983	regulatory region 667983	366 bp proximal
Tssr78863	transcription start site region 78863	307 bp upstream
Tssr78864	transcription start site region 78864	342 bp upstream
Tssr78865	transcription start site region 78865	687 bp upstream
Tssr82495	transcription start site region 82495	106 bp downstream
Tssr82496	transcription start site region 82496	223 bp downstream