rs32097922 SNP Detail

Summary

• ID
  rs32097922
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:3555077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAAGACACTT TGAAGGGGTG TGGTGGTTAG TGAGAATGAC CCCTCTAAGC TCATAAATTT
  GAATTCTCAG TCCCCAGTTG ACAGAACTGC TTGGGAAGAA TTAGGAGGTG TGGCCTTGTT
  GGAGGAGGTG TGATATTGAG GGAGGACTCT GAAGTGTCAA AAGGCCCACA CTTTGAGTCA
  GTCAGCTCTC TCTGCCTCCA GCTCATGGAT CAGATGTGAA TTCTCCTTGC CAGGATGGTT
  ATGGACTATA TCCCTCAGGA ATTGTGAGTC CAAAATTAAA TGCTTTTTTT TTTTTTTTTT
  W
  TTTACAAGCT ATCTTTATCA TGGCATTTGG TGAGAGAAAG AGAAAAGTAA CTAAGACAAA
  GGGAAATTTT ATATAAATTA AATGATAAAT TTCAGTAAGT TGGTCTCTTG GAATTAGTAA
  CTCATTTTCA TGAGACCATT AAATTTAAGA TGTTCAGTAT CAATGAAAAG TATATATAAG
  AATTTTTTAA AAGTATATAA ATTGAGCTGA GCGTGGTGGC ACACACCTTT AATCCCAGCA
  CTTAGGAGGC AGAGGCAGGC AGATTTCTGA GTTCAAGGCC AGCCTGGTCT ACAAAGTGAG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45606765	mCV23493840	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32097922					SNP	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:3555077 () rs orientation: forward

Symbol	Name	Function Class
B230117O15Rik	RIKEN cDNA B230117O15 gene	5 bp downstream
Tmem68	transmembrane protein 68	within coordinates