rs32099615 SNP Detail

Summary

• ID
  rs32099615
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:79212642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTCG GGCTTCTGAC TGAAGCCAAT
  Y
  CTGCGTGGCT GATGGGGGCC ATGCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39362564	mCV22922452	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss148197519	ENSMUSSNP3459945	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss325027130	CHEV_15_79158872	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32099615					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:79212642 () rs orientation: forward

Symbol	Name	Function Class
2310026G15Rik	RIKEN cDNA 2310026G15 gene	within coordinates
Cpgi7329	CpG island 7329	within coordinates
Pla2g6	phospholipase A2, group VI	52 bp upstream
Rr404497	regulatory region 404497	within coordinates
Rr505593	regulatory region 505593	489 bp distal
Rr505594	regulatory region 505594	701 bp distal
Rr505595	regulatory region 505595	within coordinates
Rr505596	regulatory region 505596	1001 bp proximal
Rr505597	regulatory region 505597	1142 bp proximal
Rr505598	regulatory region 505598	1500 bp proximal
Rr505599	regulatory region 505599	1631 bp proximal
Tssr132082	transcription start site region 132082	848 bp downstream
Tssr135328	transcription start site region 135328	292 bp upstream
Tssr135329	transcription start site region 135329	251 bp upstream
Tssr135330	transcription start site region 135330	181 bp upstream