rs32100089 SNP Detail

Summary

• ID
  rs32100089
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85590384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGACTGTTTT GAGCCTCCCC CAGCAAGGTC AGCTCAGGCC
  ACCCTGAGAA GAGGGAGGGA CAGAACCAGA GCCCACGAGG GGGGGGCTCT TCCTGCCTAA
  R
  GGGAAGAGGG TACATGCCCA AGGCTACTAC TTAGCAGGAG TCCTGGTGAT TCTACTACGC
  TAGAGTTGAG TGGACAGAGG CTGGGTCTCA GCCAGGTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39361889	mCV22747052	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	A
ss148271221	ENSMUSSNP189199	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32100089					SNP	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85590384 () rs orientation: forward

Symbol	Name	Function Class
Lncppara	long noncoding RNA near Ppara	within coordinates
Mirc31	microRNA cluster 31, including Mirlet7c-2 through Mirlet7b	420 bp proximal
Mirlet7b	microRNA let7b	1136 bp upstream
Mirlet7c-2	microRNA let7c-2	420 bp upstream
Rr507292	regulatory region 507292	within coordinates
Rr507293	regulatory region 507293	958 bp proximal