rs32104809 SNP Detail

Summary

• ID
  rs32104809
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:81912451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCT GTACATTCTT TACCAGGATG
  Y
  GATATTGAAA AGCAAGCATG ACCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39362903	mCV25425673	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss148229771	ENSMUSSNP1796983	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss325033192	CHEV_15_81858680	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32104809					SNP	T	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:81912451 () rs orientation: forward

Symbol	Name	Function Class
Rr506381	regulatory region 506381	108 bp distal
Tssr132336	transcription start site region 132336	204 bp downstream
Tssr132337	transcription start site region 132337	175 bp downstream
Tssr132338	transcription start site region 132338	156 bp downstream
Tssr132339	transcription start site region 132339	117 bp downstream
Tssr132340	transcription start site region 132340	258 bp upstream
Tssr132341	transcription start site region 132341	953 bp upstream
Tssr135523	transcription start site region 135523	390 bp upstream
Tssr135524	transcription start site region 135524	1336 bp downstream
Xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6	within coordinates