rs32109312 SNP Detail

Summary

• ID
  rs32109312
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95474858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGG TTAGGTATGT GGGGAGCTAT
  K
  CGAGGACAGG TTAGGTATGT GGAGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46284381	mCV22965078	ABI	CRAMUS_MOUSE	f	SNP	T	G	G					G
ss47627432	NES11432947	PERLEGEN	MM_PANEL2	f	SNP	T		G	T	G	T	G		G	G	G	G	G	T	G	T
ss145632818	ENSMUSSNP3903559	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32109312					SNP	T	G	G	T	G	T	G	G	G	G	G	G	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47627432	NES11432947	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95474858 () rs orientation: forward

Symbol	Name	Function Class
Ccl22	C-C motif chemokine ligand 22	within coordinates
Tssr2654	transcription start site region 2654	1699 bp upstream
Tssr78906	transcription start site region 78906	1280 bp downstream
Tssr78907	transcription start site region 78907	1044 bp upstream
Tssr78908	transcription start site region 78908	1616 bp upstream
Tssr78909	transcription start site region 78909	1659 bp upstream
Tssr78910	transcription start site region 78910	1776 bp upstream
Tssr78911	transcription start site region 78911	1791 bp upstream