rs32110155 SNP Detail

Summary

• ID
  rs32110155
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95474958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACAAAAC AAAACAAAAG
  ACAGGCTCAG GTTGCTATTG CCCTTGGGCT CTGCTCAGTA GTCAGTGATG CGAGGACAGG
  TTAGGTATGT GGGGAGCTAT GCGAGGACAG GTTAGGTATG TGGAGAGCCA TGCGAGGACA
  GGTTAGGTAT GTGGGGAGCC AGCAGCTCTC AGCTGTATGG CTGGACTCTT AGGAAGCAAC
  R
  ATGGAATGGC AGCAGAGACC TCACCACCAG CTGGCCTGTA CCCACCTTGC TAACTTCAGC
  TTTAGTGCCC ATAGCTGGCC CCACTTGCTT CAGGTTTCCC TTGGGTCACA CTTTGTTGGG
  TGTCTTAGTT TCTTTTCTAA TTGCTGTGCC AGATAACTGA ATTCTGGCAA GAATGACTCA
  GCGGAGAAAG AGAGTGTTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46217608	mCV22965079	ABI	CRAMUS_MOUSE	f	SNP	G	A	A					A
ss47627435	NES11432949	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	A	G	A		A	A	A	G	A	G	G	G
ss145632821	ENSMUSSNP4457667	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32110155					SNP	G	A	A	G	A	G	A	A	A	A	A	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47627435	NES11432949	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95474958 () rs orientation: forward

Symbol	Name	Function Class
Ccl22	C-C motif chemokine ligand 22	within coordinates
Tssr2654	transcription start site region 2654	1599 bp upstream
Tssr78906	transcription start site region 78906	1380 bp downstream
Tssr78907	transcription start site region 78907	944 bp upstream
Tssr78908	transcription start site region 78908	1516 bp upstream
Tssr78909	transcription start site region 78909	1559 bp upstream
Tssr78910	transcription start site region 78910	1676 bp upstream
Tssr78911	transcription start site region 78911	1691 bp upstream
Tssr78912	transcription start site region 78912	1938 bp upstream