rs32110158 SNP Detail

Summary

• ID
  rs32110158
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95476583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCAGCAGG CCTTCTAATG
  CTACAACTTT CTTCTTTACA CCTCTTCCAG TTTGATAACC GTCAAGAACC GAGATATCTG
  TGCCGATCCC AGGCAGGTCT GGGTGAAGAA GCTACTCCAT AAACTGTCCT AGGGAGGAGG
  ACCTGATGAC CATGGGTCTG GTGTGGTCCA GGGAGGCTCA GCAAGCCCTA TTCTTCTGCC
  R
  TTCCAGCAAG AGCCTTGCCA ACGACGCCAC CTTTACTCAC CTCCATCCCC TGGGCTGTCA
  CTCTGTGAGG CTCTGGTCCC TCTACCTCCC CTCTATCCCT TCCAGCTTAT CCCCCTTCAA
  TGTGGCAGCT GGGAAACACA TTCAGGCCAG CCTTACCCAA TGCCTACTCC CCACTGCTTT
  AGATGAGACC AGCGTCCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47627438	NES11432810	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A	G	A	G	A	A	A	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32110158					SNP	G	A	G	A	G	A	G	A	A	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47627438	NES11432810	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95476583 () rs orientation: forward

Symbol	Name	Function Class
Ccl22	C-C motif chemokine ligand 22	within coordinates
Tssr2654	transcription start site region 2654	25 bp downstream
Tssr78907	transcription start site region 78907	637 bp downstream
Tssr78908	transcription start site region 78908	102 bp downstream
Tssr78909	transcription start site region 78909	59 bp downstream
Tssr78910	transcription start site region 78910	51 bp upstream
Tssr78911	transcription start site region 78911	66 bp upstream
Tssr78912	transcription start site region 78912	313 bp upstream
Tssr78913	transcription start site region 78913	493 bp upstream