rs32110161 SNP Detail

Summary

• ID
  rs32110161
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95477023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTGGCCC CCTTCTCTTC
  TTGCATGTAG GGAAGGCCCA TAGGTTTCAA ATATGTGCTA CCTAGTTCCC TTTCTGGGGG
  GTTCTAATAC CCAGCATGTT TTTCCTGCTG CAGGCACCTA TCCAGTGCCA CACACCTCCC
  AAGTTTCTAT CAGTCCCAGT GGGCATCCAC CAAGCCCCAA ACTTCAGACT TCCTTGGCCT
  Y
  CACCTACTCT CAGTAGAATT CTGGGAGTTT CAGGCTGGTC CACCAGGCCC CCCAGGGTTA
  GGCCAAGGTC CCCACCAGAG CTCCTCCTGT TTCTTGGTCT GCAGCACGGG GCAGGGAGCA
  AGGAGCAGGC TCAGAATCAG ATTTCTTAAA GGAGCTGCAG ACTCCATCAG TAAAAGGAAT
  CTTTCTCCCA TCCCTGAATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47627441	NES11432811	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32110161					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47627441	NES11432811	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95477023 () rs orientation: forward

Symbol	Name	Function Class
Ccl22	C-C motif chemokine ligand 22	within coordinates
Tssr2654	transcription start site region 2654	465 bp downstream
Tssr78907	transcription start site region 78907	1077 bp downstream
Tssr78908	transcription start site region 78908	542 bp downstream
Tssr78909	transcription start site region 78909	499 bp downstream
Tssr78910	transcription start site region 78910	378 bp downstream
Tssr78911	transcription start site region 78911	362 bp downstream
Tssr78912	transcription start site region 78912	110 bp downstream
Tssr78913	transcription start site region 78913	53 bp upstream