rs32110376 SNP Detail

Summary

• ID
  rs32110376
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:112417424 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGC CTCACGTCCC ATCTTCCCCT
  R
  CTAATAAAGT TCTTATAGCC GATAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45742901	mCV24791748	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss149079773	ENSMUSSNP3729038	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss321645167	CHEV_5_112698578	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32110376					SNP	G	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:112417424 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16256	CpG island 16256	25 bp distal
Cpgi16257	CpG island 16257	1627 bp proximal
Crybb1	crystallin, beta B1	within coordinates
Gm46941	predicted gene, 46941	1163 bp downstream
Rr617313	regulatory region 617313	1006 bp proximal
Rr617314	regulatory region 617314	1831 bp proximal
Tssr47980	transcription start site region 47980	240 bp downstream
Tssr47981	transcription start site region 47981	94 bp downstream
Tssr47982	transcription start site region 47982	76 bp downstream
Tssr47983	transcription start site region 47983	62 bp downstream
Tssr47984	transcription start site region 47984	52 bp downstream
Tssr47985	transcription start site region 47985	13 bp downstream
Tssr52561	transcription start site region 52561	41 bp upstream
Tssr52562	transcription start site region 52562	7 bp upstream