rs32111794 SNP Detail

Summary

• ID
  rs32111794
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97965554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAATCAAA AACTTGTTCA
  TGGCATGAAG AAACTTAAAG GACAAGGGGG ATAAAAGTGA TGGAGGCAAA GAGCAAGAAG
  AGGCACAATC TCTCTAAGAT GACCTTTCAG CAGAAACCTC AACTAAGGGA GGAAGCAGAT
  GGGGAGTAGA AGGCTGTGTA TACACAAACA CCGAGCCTAA GACAGGAAGG TGCTTGGTGC
  R
  CTCAGGAGTC TTAACATCAA GGACGAGCAG AAAAAAGGAG GTCACAGGGA GGGAGACAAG
  GCCTCCTGCA AGTGCAAGCA TCCACTCTAC ACACAGCCAT GCTGGGCTCA CCAACAGACA
  CGGCTTCTTT GCTTTTCTCA GCCACTCATT TTCACAAAAT GCATTAGAGG ACATATTCAA
  TAGAAGCACT ACCATTTTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39364220	mCV23792947	ABI	CRAMUS_MOUSE	f	SNP	A	G			A		A
ss51762615	NES14550094	PERLEGEN	MM_PANEL2	f	SNP		G	A	G		A		A	A	A	A	A
ss148449714	ENSMUSSNP4557295	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G					A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32111794					SNP	A	G	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51762615	NES14550094	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97965554 () rs orientation: forward

Symbol	Name	Function Class
Rr315538	regulatory region 315538	847 bp proximal
Rr316424	regulatory region 316424	505 bp distal
Rr370004	regulatory region 370004	within coordinates
Senp1	SUMO1/sentrin specific peptidase 1	within coordinates