rs32112063 SNP Detail

Summary

• ID
  rs32112063
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:117841174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGT GTCAGCTGCT TAAAATCAAA
  Y
  CTCACACATT TCAATAACAG TGAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46106248	mCV24813645	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	T
ss145772534	ENSMUSSNP3582769	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32112063					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:117841174 () rs orientation: forward

Symbol	Name	Function Class
4930583K01Rik	RIKEN cDNA 4930583K01 gene	1956 bp upstream
Cpgi19616	CpG island 19616	937 bp proximal
Rr400585	regulatory region 400585	1806 bp upstream
Rr654423	regulatory region 654423	726 bp proximal
Rr654424	regulatory region 654424	1624 bp proximal
Rr654425	regulatory region 654425	1676 bp proximal
Rr654426	regulatory region 654426	1869 bp proximal
Smg1	SMG1 nonsense mediated mRNA decay associated PI3K related kinase	within coordinates
Tssr68712	transcription start site region 68712	1909 bp upstream
Tssr74428	transcription start site region 74428	1411 bp downstream
Tssr74429	transcription start site region 74429	1574 bp downstream
Tssr74430	transcription start site region 74430	1613 bp downstream
Tssr74431	transcription start site region 74431	1718 bp downstream