rs32112385 SNP Detail

Summary

• ID
  rs32112385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:47009618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGATTTA TTCTCCCACT
  TTATGGAGGG AGCTGTTGAG ACTGAACGGT TCCACAGTAA TGTAACCCTG CTAGGTGATC
  AGGTAGGCAA ACCATCCTTT CTCTTGGTTG AGTGAACAGT GGAGCCATTT GATTTGAGGG
  CTGAGGCCTT TCAATGGCCT TCCTTGTGTT CTCTCTGGCT GCTCTCCATC CTCCCCACCA
  Y
  CCTCTTGCCT TGGGAAGCAG GTGAGCAGCA GTCACACACG GCACTTCCCA GGTCTCCTCT
  CCCCCATGGC TTAGGTAGTG CTCAGCGCTT GGCAGCCCCA GAGATCCGAC ATCTGGCTGC
  TGAAGCTTGC TGCCTACTGG GAAGTAGTTC CAACAGCGCC AAGCAGGTGC AGGGAGCTGG
  AAAGGCCTGC CCTTCCAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45608266	mCV25226521	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss146270509	ENSMUSSNP1401359	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32112385					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:47009618 () rs orientation: forward

Symbol	Name	Function Class
Gm568	predicted gene 568	within coordinates
Gm68750	predicted gene, 68750	1242 bp upstream
Rr367622	regulatory region 367622	1010 bp upstream
Rr591772	regulatory region 591772	888 bp proximal
Rr591773	regulatory region 591773	1253 bp proximal
Rr591774	regulatory region 591774	1509 bp proximal
Tssr37147	transcription start site region 37147	1620 bp upstream
Tssr41615	transcription start site region 41615	1179 bp downstream
Tssr41616	transcription start site region 41616	1508 bp downstream