rs32113645 SNP Detail

Summary

• ID
  rs32113645
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100946230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGAAGTT TTGTGAACCA
  GTCCCCTAGC CACAGCTACC TATACGCCTG TAAGTCGAGG CTTCATTGTA GTGTACCAGG
  CCTTAAGGGT AGCTTAGTCT CGCCTGACTC CTCTAGCCTC AGGTCTCCAC AATCTCGCCT
  CCATTTTATG CTCTTCTGAC AAATATGAAT GGTGCCAAGA ACACTCTCTC CAGCCTCCAC
  R
  TTTTGCTGGC CTCTAGCCCT CCTACCTGGG AAGGTTCCTG ACTTGCCATT TGTGACTACT
  CCCCGCTTCC CCTCCCCACT CTGTGTGGTG TGGAGCCCTG TGTGTGCATC TGTACAGGCC
  TGAGGCAAAC CTGCTCTATC CCTTCCCTCC CTACTAAAAG TCAGACTCTC TCAGTTGAAT
  CCAGAGTTCA CTGATAGGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39364245	mCV25401750	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss148481927	ENSMUSSNP6693955	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
ss325085117	CHEV_15_100878780	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32113645					SNP	G	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100946230 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7763	CpG island 7763	737 bp distal
Fignl2	fidgetin-like 2	1845 bp downstream
Rr509881	regulatory region 509881	1501 bp distal
Rr509882	regulatory region 509882	462 bp distal
Tmdd1	transmembrane and death domain 1	952 bp upstream
Tssr136507	transcription start site region 136507	973 bp upstream
Tssr136508	transcription start site region 136508	964 bp upstream
Tssr136509	transcription start site region 136509	945 bp upstream
Tssr136510	transcription start site region 136510	920 bp upstream