rs32114006 SNP Detail

Summary

• ID
  rs32114006
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95470575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTAACTTG TTTTCTTCCA
  GTTTTTGCTG TTGCTTTGTT AAAGACTGGA TCTCACTATA ATGCCCAAAG GGTTTTGAGC
  TCTCAAGTCT AAGCAAACCC CCCCCCTTTT TTTTTACCCT CTGAAGTAGC TGGGAATACA
  GGTGTGAGCT ACCAACTCCA ACACCTGTAT TTTTTTCTAA CTAGAAATTC GTACTGGAGG
  Y
  TTGGTTTGAG TTGGAGAGGG CCACATGTTT AGTATGAAAT ACACAATACA TATTTAGTAT
  TTCTTTTCTT TTTTTAAATA TTATTTACTT ATTTATACGA GTACACTGTA GCTGTCTTCA
  GACACACACC AGAAGAGGGC ATCAGATCCC ATTACAGATG GTTGTGAGCT ACCATATGGT
  TGCTGGGAAT TGAACTCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss47627387	NES11433236	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	C	T	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32114006					SNP	T	C	T	C	T	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47627387	NES11433236	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95470575 () rs orientation: forward

Symbol	Name	Function Class
Ccl22	C-C motif chemokine ligand 22	1737 bp upstream
D8Mit210	DNA segment, Chr 8, Massachusetts Institute of Technology 210	217 bp distal
Rr668049	regulatory region 668049	125 bp proximal
Tssr78905	transcription start site region 78905	1730 bp upstream