rs32114009 SNP Detail

Summary

• ID
  rs32114009
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95471389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCTGGAGC ACACAGTCAG
  CCAGCAGGCA ACTCAACAGG TTGAATACTA AGAAAGATGA GGGATTAGCT CCCCTGTGCT
  TATGAGAGGA GCTTAGGAGA AAGTCTCTTC CTGGGCCATG TTCCAGGTTA CTTGGAGAGT
  GTGAATTCCT GAGTAGGTAG GCTTACCAAA GAAGTGACAT TTCAAACAGT CTCGATGTAC
  R
  AGTAGGAGTT TCTGCAATAA AGAAGCAGAA AGTGGAAATA TAGTCAGGGT CAGGCCATAG
  ATCTCTTTGG GGAACCGTAA AGCAGTGTGG CGTGATCCCT CTGACTGTGG TGAATAGTTT
  TGGAAAAGAG GCCCTGAAGG CCCTAGTCAG GAGCCTGGGT TTCATCCTCC GGTGAATGGG
  GAGCCCAGCA TGGCTTTAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47627390	NES11433198	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G	A	G	G	G	G	G	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32114009					SNP	A	G	A	G	A	G	G	G	G	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47627390	NES11433198	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95471389 () rs orientation: forward

Symbol	Name	Function Class
Ccl22	C-C motif chemokine ligand 22	923 bp upstream
D8Mit210	DNA segment, Chr 8, Massachusetts Institute of Technology 210	1031 bp distal
Rr668049	regulatory region 668049	668 bp distal
Tssr78905	transcription start site region 78905	916 bp upstream