rs32114514 SNP Detail

Summary

• ID
  rs32114514
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:81355953 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGT AAAGAGTTAC TGTGTTATTA
  R
  CACAGTGGCT CCTGACTCAC AGCGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46106548	mCV23900223	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss145163553	ENSMUSSNP5471435	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32114514					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81355953 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi19358	CpG island 19358			43 bp proximal
Gm32579	predicted gene, 32579			1947 bp downstream
Homer2	homer scaffolding protein 2			Intron
				Noncoding-Transcript-Variant
Rr650185	regulatory region 650185			within coordinates
Rr650186	regulatory region 650186			594 bp proximal
Tssr73349	transcription start site region 73349			652 bp downstream
Tssr73350	transcription start site region 73350			685 bp downstream
Tssr73351	transcription start site region 73351			700 bp downstream
Tssr73352	transcription start site region 73352			877 bp downstream