rs32115205 SNP Detail

Summary

• ID
  rs32115205
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164286079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGCCTACCGG CGGCACGGCA AGCCAATCGC CAGCGCCGAG
  AAGGCGGGGC CTGAGCCCCC GAAGGGGCGG GCGCGGGGCC CCGCACAAAG GAGCCGGCAA
  R
  GCTAAAGGGG CTGGCACCGC AGCAGGGGTG CGGAGAGGGA CTGGGGGCGG GTGAGTACTG
  CTCCCGCAGC TCTGCTGGCC CTCTCTCTGC CCCGAGCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45108329	mCV25296168	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145978938	ENSMUSSNP5198607	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs32115205					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164286079 () rs orientation: forward

Symbol	Name	Function Class
Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	155 bp upstream
Cpgi945	CpG island 945	within coordinates
Gm32391	predicted gene, 32391	13 bp upstream
Gm70485	predicted gene, 70485	1101 bp downstream
Gm70492	predicted gene, 70492	within coordinates
Rr422210	regulatory region 422210	1901 bp distal
Rr422212	regulatory region 422212	400 bp distal
Rr422213	regulatory region 422213	166 bp distal
Rr422214	regulatory region 422214	250 bp distal
Rr422215	regulatory region 422215	within coordinates
Rr422216	regulatory region 422216	86 bp distal
Rr422217	regulatory region 422217	6 bp proximal
Rr422218	regulatory region 422218	226 bp proximal
Rr422219	regulatory region 422219	1909 bp proximal
Tssr9788	transcription start site region 9788	7 bp upstream
Tssr9789	transcription start site region 9789	26 bp upstream
Tssr14746	transcription start site region 14746	498 bp upstream
Tssr14747	transcription start site region 14747	147 bp upstream
Tssr14748	transcription start site region 14748	215 bp downstream