rs32115805 SNP Detail

Summary

• ID
  rs32115805
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79043585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATC TGATTTTTTT TTTCTAATTC
  Y
  TTATTTAACA TTAAAAAGAA AGAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46106464	mCV23902384	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss145130860	ENSMUSSNP2491083	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32115805					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79043585 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19293	CpG island 19293	1115 bp distal
Fanci	Fanconi anemia, complementation group I	within coordinates
Rr158102	regulatory region 158102	385 bp distal
Rr168040	regulatory region 168040	185 bp distal
Rr171823	regulatory region 171823	16 bp proximal
Rr400387	regulatory region 400387	1424 bp downstream
Tssr67345	transcription start site region 67345	1491 bp downstream